Setbacks happen bud, just something to keep in mind. Better late than never, after all! Especially if it's just one day, on a fairly large project like this.
I'd make sure you weren't letting it run too rich, as that can be bad too. You seem like a smart kid, you might want to at least do some reading on the so-called Motoman break in method. You can find some quick reading on it here: http://www.mototuneusa.com/break_in_secrets.htm
I've had good results with it, friends have had good results with it, and it's been recommended to me by several builders with WAY more experience than either of us have.
Try offering your little brother a reward if he's good. Ya know, something like "Hey, I'll take you out to ice cream if you behave today" or whatever. Works like a charm for my niece, and she's a little hellion herself.