Justin is referring to this flange...
Its an old picture, prior to buffing out the tooling marks. For more recent pictures, different views, and the intended use, click.. http://forums.hybridz.org/showthread.php?t=117607
Justin is right, and they're raised a bit as well. The flange is currently sized at 1.753" OD. There is some amount of latitude in runner ID with alternate wall thickness tubing. With the runner height as-is, anything smaller than 1.5" ID will put the floor of the runner above the floor of the port.
To some extent, some of these variables could be manipulated, beforehand.
Justin and I will continue our plot to build a few. Until then, keep us posted on what you guy's want.