For 93 octane, I would keep the CR below 11:1. I would use a piston that gets you the CR your looking for with a stock head gasket.
I have a Bob Sharp prepared C production crank going in my race motor build. There is no knife edging, no lightening, all standard dimensions. They basically deburred the casting, drilled out the plugs and tapped them NPT, and tuftriding. Then they verified straightness, balance, and an ultra polish to the journals. They never had any problems with L28 cranks.
IMO, you will be spending a lot on machining for little to no gain. I just got the bill from my machinist: $2100. Basic boring, balancing, checking, polishing, mainline hone, rod sizing, cleaning, head and block resurface, etc. etc. But nothing like you are talking about.
It's going to cost a lot for all the machining for what, 50cc displacement?
If you are getting custom pistons anyway: L28 crank and rods, E88, 89mm custom flat top pistons, 1mm big bore head gasket = 2949cc @ 10.63:1 CR. Or if you want a better rod to stroke ratio use 9mm L24 rods and adjust the piston compression height to get the right deck clearance and CR.
Pete