just a note, my flywheel was machined as well and the previous owner said that ever since the clutch was done it felt funny going into gear.
I later read on some published repair info that VG30 flywheels aren't supposed to be machined that much for whatever reason. (can't recall).
but I've been told otherwise by VG Owners. My car had trouble going into reverse sometimes, and I could not get it into gear without grinding.
I adjusted the pedal rod and bled the system, and I had the fork moving so much that the throw-out bearing collar would rub on the pressure plate fingers. it's my suspicion that it was related to the flywheel, which looked to have hairline cracks and heatwear marks.
I've yet to install my Fidanza unit and stainless line to replace everything because I can't get a broken manifold stud out of the head.
another thing to note is that while you can have a friend press the clutch pedal and experience full pedal depression and slave-piston expansion, you may be experiencing the opposite under load, with the input shaft spinning it may be binding on the collar or the slave may not be functioning properly.
I also noticed my pilot bushing had a weird grind mark on it. perhaps from install or maybe they could not fully remove the one that was in there at the time.