Sorry to say, those guys don't understand how to tune sidedrafts.
Good observations. The lean spot could be due to the e-tube and not the pumps. Different dynos will have different AFR profiles, especially at the start of the run, depending on the type of dyno and its settings. A load-bearing dyno such as a Dynapack has the ability to hold the car at WOT for a set amount of time before beginning the pull. This gets rid of transients (accel pump shot) and makes the runs much more consistent back-to-back. Ideally, once the main circuit is tuned in this manner, the pumps can then be tuned by performing transient tests. Weber designed all their emulsion tubes for downdrafts. None of them are optimized for the DCOE.