You seem to have a pretty good grasp of the issues and most available options; and yes, the outer stub axles are "generally" the weakest link in the system. However, there are a couple other considerations which will factor in to your overall result: which transmission you end up with; which tire/wheel setup you end up with, and driving usage.
1) Auto trans are generally kinder to the drivetrain.
2) Big, sticky tires are generally less kind to the drivetrain.
3) Heavier cars are generally less kind to the drivetrain.
4) A smoother/gentler driving style is ALWAYS more kind to the drivetrain. (By far, the biggest factor within your control.)
The stock half-shafts are surprisingly stout, when maintained in good working order. Mine have lasted several years of hard autocross and track use with 275-width R-compound tires (I've broken the R180; but no problems with the half-shafts, side axles or stub axles) . If yours are working now, I would suggest continue using them until they fail. By then, you'll have a better idea on your objective setup and goals for the car. Making big changes to the rear end now is really just a lot of time and expense for something that you may never actually need.
FYI -- if you decide you really need CV axles, keep in mind that many (most?) of those solutions limit your rear sway bar options.